BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B11LP1|AL428858
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1369 1777 0.0
>3x_Contig1369
Length = 7461
Score = 1777 bits (895), Expect = 0.0
Identities = 904/907 (99%), Gaps = 1/907 (0%)
Strand = Plus / Plus
Query: 1 acggaagatcttactaagaaacatttwagaagagtatcagaaggaaattaccgagcaacg 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1076 acggaagatcttactaagaaacatttt-gaagagtatcagaaggaaattaccgagcaacg 1134
Query: 61 gaaacagcaactcagagggtacaatggcggcccattgactgatgctgaaagtaaaaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 gaaacagcaactcagagggtacaatggcggcccattgactgatgctgaaagtaaaaacat 1194
Query: 121 cgaacaaatcataaacaagcgttacgattatwagcatggtatcacccctcctttgtataa 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1195 cgaacaaatcataaacaagcgttacgattataagcatggtatcacccctcctttgtataa 1254
Query: 181 tgctcgcaaccgtcgcttcagacataggatgggaccaactgcctttgattatgtggaacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 tgctcgcaaccgtcgcttcagacataggatgggaccaactgcctttgattatgtggaacg 1314
Query: 241 tactgttgaaaaattattgaaattagatgctgaagctgaagagttcgggtacgagctagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 tactgttgaaaaattattgaaattagatgctgaagctgaagagttcgggtacgagctagt 1374
Query: 301 taatgaggatgcaattcaacagcaaaggtctacaagtgcagcagatcttgcacattatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 taatgaggatgcaattcaacagcaaaggtctacaagtgcagcagatcttgcacattatca 1434
Query: 361 aaaggctggtgagcatatggatgaaacatcttctgttggctacagccaagagatcaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 aaaggctggtgagcatatggatgaaacatcttctgttggctacagccaagagatcaaacc 1494
Query: 421 acatcatgttacaggtgccgcggaagaagatgaggaagaggatcatgaagaagatcttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 acatcatgttacaggtgccgcggaagaagatgaggaagaggatcatgaagaagatcttga 1554
Query: 481 attggaattggaacaagctctacaaacagaaactactgatggttctataccggcaagcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 attggaattggaacaagctctacaaacagaaactactgatggttctataccggcaagcat 1614
Query: 541 ggttaatggaccggctggagcagcgatgtctacagatactggcagtgttgtaagaccagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 ggttaatggaccggctggagcagcgatgtctacagatactggcagtgttgtaagaccagg 1674
Query: 601 acaacttcttgaggagaccggtgatgacgttgaacaagataacggtgatgatgaagacga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 acaacttcttgaggagaccggtgatgacgttgaacaagataacggtgatgatgaagacga 1734
Query: 661 agaggaggaggacgaagaggaagaagaggaggaagaagaggatgaagaagaggaggatga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 agaggaggaggacgaagaggaagaagaggaggaagaagaggatgaagaagaggaggatga 1794
Query: 721 agagaacggtgctgatggattatccggatcagttacaacaggaacaactaagtcacgtgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1795 agagaacggtgctgatggattatccggatcagttacaacaggaacaactaagtcacgtgt 1854
Query: 781 ctcagacaacgatggtgctaacgaagaagagcaacacagagaattattacttgatgaatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 ctcagacaacgatggtgctaacgaagaagagcaacacagagaattattacttgatgaatt 1914
Query: 841 gagggaactagaaagtacgttagaattaaaccggaataaagccagtaggactacgaatcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 gagggaactagaaagtacgttagaattaaaccggaataaagccagtaggactacgaatcc 1974
Query: 901 gttgtta 907
|||||||
Sbjct: 1975 gttgtta 1981
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8467
Number of Sequences: 1807
Number of extensions: 8467
Number of successful extensions: 324
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)